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OSA Publishing

1 March 2020, Volume 11, Issue 3, pp. 1216-1711   34 articles

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Optical Biosensors

Fiber optic interferometric immunosensor based on polydimethilsiloxane (PDMS) and bioactive lipids

Biomed. Opt. Express 11(3), 1316-1326 (2020)  View: HTML | PDF

25th Anniversary of STED Microscopy and the 20th Anniversary of SIM: feature introduction

Biomed. Opt. Express 11(3), 1707-1711 (2020)  View: HTML | PDF

Review

Deep learning in single-molecule microscopy: fundamentals, caveats, and recent developments [Invited]

Biomed. Opt. Express 11(3), 1633-1661 (2020)  View: HTML | PDF

Microscopy

Quantitative phase imaging of stromal prognostic markers in pancreatic ductal adenocarcinoma

Biomed. Opt. Express 11(3), 1354-1364 (2020)  View: HTML | PDF

Colorimetrical uncertainty of a hyperspectral imaging microscopy system for assessing whole-slide imaging devices

Biomed. Opt. Express 11(3), 1449-1461 (2020)  View: HTML | PDF

Automated single cardiomyocyte characterization by nucleus extraction from dynamic holographic images using a fully convolutional neural network

Biomed. Opt. Express 11(3), 1501-1516 (2020)  View: HTML | PDF

High-speed combined reflectance confocal and moxifloxacin based two-photon microscopy

Biomed. Opt. Express 11(3), 1555-1567 (2020)  View: HTML | PDF  [Suppl. Mat. (5)]

Design of a high-resolution light field miniscope for volumetric imaging in scattering tissue

Biomed. Opt. Express 11(3), 1662-1678 (2020)  View: HTML | PDF

Multimodal Imaging

In vivo ultrasound-switchable fluorescence imaging using a camera-based system

Biomed. Opt. Express 11(3), 1517-1538 (2020)  View: HTML | PDF

Optical Biophysics and Photobiology

Three-dimensional label-free observation of individual bacteria upon antibiotic treatment using optical diffraction tomography

Biomed. Opt. Express 11(3), 1257-1267 (2020)  View: HTML | PDF

Optical Coherence Tomography

Steerable OCT catheter for real-time assistance during teleoperated endoscopic treatment of colorectal cancer

Biomed. Opt. Express 11(3), 1231-1243 (2020)  View: HTML | PDF

Quantification of structural and microvascular changes for diagnosing early-stage oral cancer

Biomed. Opt. Express 11(3), 1244-1256 (2020)  View: HTML | PDF

Testing a phantom eye under various signal-to-noise ratio conditions using eleven different OCT devices

Biomed. Opt. Express 11(3), 1306-1315 (2020)  View: HTML | PDF

Dual-mode line-field confocal optical coherence tomography for ultrahigh-resolution vertical and horizontal section imaging of human skin in vivo

Biomed. Opt. Express 11(3), 1327-1335 (2020)  View: HTML | PDF

Blood flow rate estimation in optic disc capillaries and vessels using Doppler optical coherence tomography with 3D fast phase unwrapping

Biomed. Opt. Express 11(3), 1336-1353 (2020)  View: HTML | PDF  [Suppl. Mat. (2)]

Editors' Pick

In vivo assessment of functional and morphological alterations in tumors under treatment using OCT-angiography combined with OCT-elastography

Biomed. Opt. Express 11(3), 1365-1382 (2020)  View: HTML | PDF

Deep learning segmentation for optical coherence tomography measurements of the lower tear meniscus

Biomed. Opt. Express 11(3), 1539-1554 (2020)  View: HTML | PDF

FlyNet 2.0: drosophila heart 3D (2D + time) segmentation in optical coherence microscopy images using a convolutional long short-term memory neural network

Biomed. Opt. Express 11(3), 1568-1579 (2020)  View: HTML | PDF  [Suppl. Mat. (5)]

Comparative study of deep learning models for optical coherence tomography angiography

Biomed. Opt. Express 11(3), 1580-1597 (2020)  View: HTML | PDF

Optical Diagnostics

Real-time diagnosis and visualization of tumor margins in excised breast specimens using fluorescence lifetime imaging and machine learning

Biomed. Opt. Express 11(3), 1216-1230 (2020)  View: HTML | PDF  [Suppl. Mat. (2)]

Tumor detection of the thyroid and salivary glands using hyperspectral imaging and deep learning

Biomed. Opt. Express 11(3), 1383-1400 (2020)  View: HTML | PDF

Editors' Pick

Towards real-time wide-field fluorescence lifetime imaging of 5-ALA labeled brain tumors with multi-tap CMOS cameras

Biomed. Opt. Express 11(3), 1598-1616 (2020)  View: HTML | PDF  [Suppl. Mat. (1)]

Optical Therapies

Near-infrared light driven tissue-penetrating cardiac optogenetics via upconversion nanoparticles in vivo

Biomed. Opt. Express 11(3), 1401-1416 (2020)  View: HTML | PDF  [Suppl. Mat. (3)]

Photoacoustic Imaging and Spectroscopy

Vascular bifurcation mapping with photoacoustic microscopy

Biomed. Opt. Express 11(3), 1298-1305 (2020)  View: HTML | PDF

Toward whole-brain in vivo optoacoustic angiography of rodents: modeling and experimental observations

Biomed. Opt. Express 11(3), 1477-1488 (2020)  View: HTML | PDF

Terahertz Spectroscopy and Imaging

Investigation of water diffusion dynamics in corneal phantoms using terahertz time-domain spectroscopy

Biomed. Opt. Express 11(3), 1284-1297 (2020)  View: HTML | PDF

Co-registered combined OCT and THz imaging to extract depth and refractive index of a tissue-equivalent test object

Biomed. Opt. Express 11(3), 1417-1431 (2020)  View: HTML | PDF

Tissue Optics and Spectroscopy

Fluorescence of serotonin in the visible spectrum upon multiphotonic photoconversion

Biomed. Opt. Express 11(3), 1432-1448 (2020)  View: HTML | PDF

Spotlight on Optics

Estimating intracranial pressure using pulsatile cerebral blood flow measured with diffuse correlation spectroscopy

Biomed. Opt. Express 11(3), 1462-1476 (2020)  View: HTML | PDF

Determination of the optical properties of cholesteatoma in the spectral range of 250 to 800 nm

Biomed. Opt. Express 11(3), 1489-1500 (2020)  View: HTML | PDF

Predictive model for the quantitative analysis of human skin using photothermal radiometry and diffuse reflectance spectroscopy

Biomed. Opt. Express 11(3), 1679-1696 (2020)  View: HTML | PDF

Optical characterization of porcine tissues from various organs in the 650–1100 nm range using time-domain diffuse spectroscopy

Biomed. Opt. Express 11(3), 1697-1706 (2020)  View: HTML | PDF  [Suppl. Mat. (2)]

Vision and Visual Optics

Analysis of CNN-based remote-PPG to understand limitations and sensitivities

Biomed. Opt. Express 11(3), 1268-1283 (2020)  View: HTML | PDF

Wide-vergence, multi-spectral adaptive optics scanning laser ophthalmoscope with diffraction-limited illumination and collection

Biomed. Opt. Express 11(3), 1617-1632 (2020)  View: HTML | PDF

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