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Conferences > BRAIN > 2018 > BF4C > BF4C.2
  • Biophotonics Congress: Biomedical Optics Congress 2018 (Microscopy/Translational/Brain/OTS)
  • OSA Technical Digest (Optica Publishing Group, 2018),
  • paper BF4C.2
  • •https://doi.org/10.1364/BRAIN.2018.BF4C.2

An automated pipeline for the collection, transfer, and processing of large-scale tomography data

Ming Du, Rafael Vescovi, Ryan Chard, Narayanan Kasthuri, Chris Jacobsen, Eva Dyer, and Doğa Gürsoy

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Abstract

We introduce an automated and scalable data collection, transfer, and processing pipeline for tomographic measurement of centimeter-sized mouse brains with sub-micrometer resolution. Parallelized computation is implemented in data processing to allow fast handling of tera-voxel sized datasets.

© 2018 The Author(s)

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